Syngenta-PSC Fellowship Publications

Sailer, C., Tiberi, S., Schmid, B. et al. Apomixis and genetic background affect distinct traits in Hieracium pilosella L. grown under competition. BMC Biol 19, 177 (2021). https://doi.org/10.1186/s12915-021-01117-x

Wyler, M., Stritt, C., Walser, J.C., Baroux, C., Roulin, AC. (2020). Impact of transposable elements on methylation and gene expression across natural accessions of Brachypodium distachyon. Genome Biology & Evolution, evaa180. https://doi.org/10.1093/gbe/evaa180

Skalska, A., Stritt, C., Wyler, M., Williams, H., Vickers, M., Han, J., Tuna, M., Savas Tuna, G., Susek, K., Swain, M., Corke, F., Doonan, J., Roulin, AC., Hasterok, R., Mur, LAJ. (2020). Genetic, epigenetic and transcriptomic analyses of Turkish Brachypodium distachyon accessions differentiates two geographically distinct subpopulations. Int. J. Mol. Sci. 21, 6700; DOI: :10.3390/ijms21186700

Takashi Tsuchimatsu, Hiroyuki Kakui, Misako Yamazaki, Cindy Marona, Hiroki Tsutsui, Afif Hedhly, Dazhe Meng, Yutaka Sato, Thomas Städler, Ueli Grossniklaus, Masahiro M. Kanaoka, Michael Lenhard, Magnus Nordborg and Kentaro K. Shimizu. Adaptive reduction of male gamete number in the selfing plant Arabidopsis thaliana. Nature Communications. 8 June 2020. DOI: 10.1038/s41467-020-16679-7

Xin Ma, Jasmin Wiedmer and Javier Palma-Guerrero (2020). Small RNA Bidirectional crosstalk during the interaction between wheat and Zymoseptoria tritici. Front. Plant Sci., https://doi.org/10.3389/fpls.2019.01669

Luisa K. Schaefer, Francis Parlange, Gabriele Buchmann, Esther Jung, Andreas Wehrli, Gerhard Herren, Marion Claudia Müller, Jonas Stehlin, Roman Schmid, Thomas Wicker, Beat Keller and Salim Bourras (2020), Cross-kingdom RNAi of pathogen effectors leads to quantitative adult plant resistance in wheat. Frontiers in Plant Science. https://doi.org/10.3389/fpls.2020.00253

Xin Ma, Beat Keller, Bruce A. McDonald, Javier Palma-Guerrero, Thomas Wicker  (2018) Comparative Transcriptomics Reveals How Wheat Responds to Infection by Zymoseptoria tritici. Mol Plant Microbe Interact. 2018 Apr; 31(4):420-431. doi: 10.1094/MPMI-10-17-0245-R.

Kørner CJ, Pitzalis N, Peña EJ, Erhardt M, Vazquez F, Heinlein M (2018) Crosstalk between PTGS and TGS pathways in natural antiviral immunity and disease recovery. Nat Plants 4:157-164.

Palma-Guerrero J, Ma X, Torriani SFF, Zala M, Francisco CS, Hartmann F, Croll D, McDonald BA (2017) Comparative transcriptome analyses in Zymoseptoria tritici reveal significant differences in gene expression among strains during plant infection, Mol Plant Microbe Interact. 2017 Mar; 30(3):231-244. doi: 10.1094/MPMI-07-16-0146-R.2017.

Zürcher E; Liu J; di Donato M; Geisler M; Muller B (2016). Plant development regulated by cytokinin sinks. Science 353 (6303): 1027-1030.

Muller DB, Vogel C, Bai Y, Vorholt JA (2016). The plant microbiota: Systems-level insights and perspectives. Annual Rev of Genetics, 50, 50: 211-234.

Sailer C, Schmid B, Grossniklaus U (2016). Apomixis allows the transgenerational fixation of phenotypes in hybrid plants. Current Biology, 28. Januar 2016. Doi: 10.1016/j.cub.2015.12.045

Vogel C, Bodenhausen N, Gruissem W and Vorholt JA (2016). The Arabidopsis leaf transcriptome reveals distinct but also overlapping responses to colonization by phyllosphere commensals and pathogen infection with impact on plant health. New Phytol. Doi:10.1111/nph.14036

Bailly A., Groenhagen U., Schulz S., Geisler M., Eberl L. and Weisskopf L. (2014). The inter-kingdom volatile signal indole promotes root development by interfering with auxin signalling. The Plant Journal (80), 758–771.

Sailer C, Schmid B, Stöcklin J, and Grossniklaus U (2014). Sexual Hieracium pilosella plants are better between-species, while apomictic plants are better within-species competitors. PPEES, Vol. 16, 43-51.

Kradolfer D, Wolff P, Jiang H, Siretskiy A and Köhler C (2013) An imprinted gene underlies postzygotic reproductive isolation in Arabidopsis thaliana, Developmental Cell, Volume 26, Issue 5, 525-535

Fakheran S, Paul-Victor C, Heichinger C, Schmid B, Grossniklaus U, Turnbull LA (2010) Adaptation and extinction in experimentally fragmented landscapes. Proc Natl Acad Sci USA. 2010 Nov 2; 107(44):19120-5. doi: 10.1073/pnas.1010846107. Epub 2010 Oct 18.

Kritsas K, Wuest SE, Hupalo D, Kern AD, Wicker T, Grossniklaus U (2012) Computational analysis and characterization of UCE-like (ULEs) in plant genomes. Genome Research 22(12):2455-66; 2012 Decdoi: 10.1101/gr.129346.111

Blom D, Fabbri C, Connor EC, Schiestl FP, Klauser DR, Boller T, Eberl L, Weisskopf L (2011) Production of plant growth modulating volatiles is widespread among rhizosphere bacteria and strongly depends on culture conditions. Environ Microbiol. 13(11):3047-58. doi: 10.1111/j.1462-2920.2011.02582.x. Epub 2011 Sep 20. PMID: 21933319

Groenhagen U, Baumgartner R, Bailly A, Gardiner A, Eberl L, Schulz S, Weisskopf L. (2013) Production of bioactive volatiles by different Burkholderia ambifaria Strains. Chem Ecol. 2013 Jul 7. PMID: 23832658

Bailly A, Weisskopf L (2012) The modulating effect of bacterial volatiles on plant growth: Current knowledge and future challenges. Plant Signal Behav. 2012 Jan;7(1):79-85. doi: 10.4161/psb.7.1.18418. PMID: 22301973

Kradolfer D, Hennig L, Köhler C (2013) Increased maternal genome dosage bypasses the requirement of the FIS polycomb repressive complex 2 in Arabidopsis seed development. PLoS Genetics 9(1):e1003163; 2013 Jan

von Felten S, Niklaus PA, Scherer-Lorenzen M, Hector A, Buchmann N (2012) Do grassland plant communities profit from N partitioning by soil depth? Ecology 93:2386–2396

Blom D, Fabbri C, Eberl E and Weisskopf L (2011) Volatile-mediated killing of Arabidopsis thaliana by bacterial volatiles is mainly due to hydrogen cyanide. Applied and Environmental Microbiology 77(3):1000-1008

von Felten S, Hector A, Buchmann N, Niklaus PA, Schmid B, Scherer-Lorenzen M. 2009. Belowground nitrogen partitioning in experimental grassland plant communities of varying species richness. Ecology, 90(5):1389-99.

Reiland S, Messerli G, Baerenfaller K, Gerrits B, Endler A, Grossmann J, Gruissem W, Baginsky S. 2009. Large-scale Arabidopsis phosphoproteome profiling reveals novel chloroplast kinase substrates and phosphorylation networks. Plant Physiol, 150(2):889-903.

Lee YP, Fleming AJ, Körner Ch, Meins F Jr. 2009. Differential expression of the CBF pathway and cell cycle-related genes in Arabidopsis accessions in response to chronic low-temperature exposure. Plant Biol, (Stuttg). 11(3):273-83.

von Felten S, Buchmann N, Scherer-Lorenzen M. 2008. Preferences for different nitrogen forms by coexisting plant species and soil microbes: comment. Ecology, 89(3):878-9; discussion 879-80.