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ProDoc Publications

O'Brien, M. J., Philipson, C. D., Reynolds, G., Dzulkifli, D., Snaddon, J. L., Ong, R., & Hector, A. (2019). Positive effects of liana cutting on seedlings are reduced during El Niño‐induced drought. Journal of Applied Ecology, 56(4), 891-901.

Tuck S.L., O'Brien M.J., Philipson C.D., Saner P., Tanadini M., Dzulkifli D., Godfray H.C.J., Godoong E., Nilus R., Ong R.C., Schmid B., Sinun W., Snaddon J.L., Snoep M., Tangki H., Tay J., Ulok P., Sau Wai Y., Weilenmann M., Reynolds G., Hector A. (2016) The value of biodiversity for the functioning of tropical forests: insurance effects during the first decade of the Sabah Biodiversity Experiment. Proceedings of the Royal Society B: Biological Sciences 1451

Philipson C.D., Dent D.H., Chamagne J., O'Brien M.J., Dzulkifli D., Nilus R., Philips S., Reynolds G., Saner P., Hector A. (2014) A trait-based trade-off between growth and mortality: Evidence from 15 tropical tree species using size-specific relative growth rates. Ecology and Evolution. 4 (18) 3675–3688

Zu, P., Schiestl, F. P., Gervasi, D., Li, X., Runcie, D., & Guillaume, F. (2019). Floral signals evolve in a predictable way under artificial and pollinator selection in Brassica rapa using a G-matrix. bioRxiv, 675413.

Schiestl, F. P., Balmer, A., & Gervasi, D. D. (2018). Real‐time evolution supports a unique trajectory for generalized pollination. Evolution, 72(12), 2653-2668.

Gervasi, D. D., Selosse, M. A., Sauve, M., Francke, W., Vereecken, N. J., Cozzolino, S., & Schiestl, F. P. (2017). Floral scent and species divergence in a pair of sexually deceptive orchids. Ecology and evolution, 7(15), 6023-6034.

Gervasi, D. D., & Schiestl, F. P. (2016). Do more efficient pollinators drive floral trait evolution in plants with generalized pollination?. Pollinator-Driven Floral Evolution, 76.

Gervasi, D. D., & Schiestl, F. P. (2016). Effects of changing pollinator environments on plant trait evolution; an experimental evolution approach. Pollinator-Driven Floral Evolution, 28.

Gervasi, D. D., Selosse, M. A., & Schiestl, F. P. (2016). Mechanisms of reproductive isolation in a species pair of sexually deceptive orchids. Pollinator-Driven Floral Evolution, 106.

Giuggiola, A., Zweifel, R., Feichtinger, L. M., Vollenweider, P., Bugmann, H., Haeni, M., & Rigling, A. (2018). Competition for water in a xeric forest ecosystem–effects of understory removal on soil micro-climate, growth and physiology of dominant Scots pine trees. Forest ecology and management, 409, 241-249.

Rebetez, M., von Arx, G., Gessler, A., Pannatier, E. G., Innes, J. L., Jakob, P., Haeni, M.,... & Schmitt, M. (2018). Meteorological data series from Swiss long-term forest ecosystem research plots since 1997. Annals of Forest Science, 75(2), 41.

Jucker, T., Caspersen, J., Chave, J., Antin, C., Barbier, N., Bongers, F., Haeni, M., ... & Higgins, S. I. (2017). Allometric equations for integrating remote sensing imagery into forest monitoring programmes. Global change biology, 23(1), 177-190.

Gessler, A., Roy, J., Kayler, Z., Ferrio, J. P., Alday, J. G., Bahn, M., Haeni, M., ... & Martín-Gomez, P. (2017). Night and day–circadian regulation of night-time dark respiration and light-enhanced dark respiration in plant leaves and canopies. Environmental and experimental botany, 137, 14-25.

Zweifel, R., Haeni, M., Buchmann, N., & Eugster, W. (2016). Are trees able to grow in periods of stem shrinkage?. New Phytologist, 211(3), 839-849.

Millhäusler, A., Anderwald, P., Haeni, M., & Haller, R. M. (2016). Publicity, economics and weather–Changes in visitor numbers to a European National Park over 8 years. Journal of outdoor recreation and tourism, 16, 50-57.

Hommel R., Siegwolf R., Zavadlav S., Arend M., Schaub M., Galiano L., Haeni M., Kayler Z., Gessler A. (2016). Impact of interspecific interaction and drought on the allocation of new assimilates within trees. Palnt Biology.

Zweifel R., Haeni M. (2015) TreeNet - Technischer Bericht 2014. V1.33. Technical Report, WSL.

Schaub M., Haeni M., Ferretti M., Gottardini E., Calatayud V. (2015) Ground level ozone concentrations and exposures from 2000 to 2013. In: Michel A, Seidling W (eds) Forest Condition in Europe: 2015 Technical Report of ICP Forests. Report under the UNECE Convention on Long-Range Transboundary Air Pollution (CLRTAP). Vienna: BFW Austrian Research Centre for Forests. BFW Dokumentation 21/2015. 182 pp.

Schaub M., Haeni M., Ferretti M., Gottardini E., Simpson D., Calatayud V. (2015) Ozone risk assessment for European forests – A ten-year study on permanent monitoring plot. In: P. Sicard, E. Paoletti, A. Bytnerowicz (eds.), Challenges of Air Pollution and Climate Change to Forests, Programme and Abstracts, IUFRO Research Group 7.01, 1-5 June, 2015, Nice, France, 171 pp

Schaub M., Ferretti M., Gottardini E., Calatayud V., Haeni M. (2015) 2000-2013 ozone trends across Europe, p. 38. In: W. Seidling (ed.) Book of abstracts: Long-term trends and effects of air pollution on forest ecosystems, their services, and sustainability, 4th ICP Forests Scientific Conference, May 2015, Ljubljana, Slovenia, 52 pp. ISBN 978-961-6425-87-2

UNCCD (Haeni M., Saner P. et al.) (2015) Assessment of implementation of the Convention: Financing and technology transfer. ICCD/CRIC(13)/6/Rev.1

UNCCD (Haeni M., Saner P. et al.) (2015) Review of the financial support to the implementation of the Convention. ICCD/CRIC(13)/7/Rev.1

Wolf S., Eugster W., Ammann C., Haeni M., Zielis S., Hiller R., Stieger J., Imer D., Merbold L., Buchmann N. (2013) Contrasting response of grassland versus forest carbon and water fluxes to spring drought in Switzerland. Environmental Research Letters, 8, 035007.

Zielis S., Etzold S., Zweifel R., Eugster W., Haeni M., Buchmann N. (2013) Forest NEP is significantly driven by previous year’s weather. Biogeosciences Discussion, 10, 15587-15611

Hartman, K., & Tringe, S. G. (2019). Interactions between plants and soil shaping the root microbiome under abiotic stress. Biochemical Journal, 476(19), 2705-2724.

Ramirez, K. S., Knight, C. G., De Hollander, M., Brearley, F. Q., Constantinides, B., Cotton, A., Hartman, K. J., ... & Dorrepaal, E. (2018). Detecting macroecological patterns in bacterial communities across independent studies of global soils. Nature Microbiology, 3(2), 189-196.

Hartman, K., Van Der Heijden, M. G., Wittwer, R. A., Banerjee, S., Walser, J. C., & Schlaeppi, K. (2018). Cropping practices manipulate abundance patterns of root and soil microbiome members paving the way to smart farming. Microbiome, 6(1), 14.

Hartman, K., van der Heijden, M.G.A., Roussely-Provent, V., Walser, J.-C., Schlaeppi, K. (2017) Deciphering composition and function of the root microbiome of a legume plant. Microbiome 5 (2)

Mahrez, W., & Hennig, L. (2018). Mapping of histone modifications in plants by tandem mass spectrometry. In Plant Chromatin Dynamics (pp. 131-145). Humana Press, New York, NY.

Trejo‐Arellano, M. S., Mahrez, W., Nakamura, M., Moreno‐Romero, J., Nanni, P., Köhler, C., & Hennig, L. (2017). H3K23me1 is an evolutionarily conserved histone modification associated with CG DNA methylation in Arabidopsis. The Plant Journal, 90(2), 293-303.

Mahrez, W., Shin, J., Munoz-Viana, R., Figueiredo, D. D., Trejo-Arellano, M. S., Exner, V., ... & Hennig, L. (2016). BRR2a affects flowering time via FLC splicing. PLoS genetics, 12(4).

Mahrez, W., Arellano, M. S. T., Moreno-Romero, J., Nakamura, M., Shu, H., Nanni, P., ... & Hennig, L. (2016). H3K36ac is an evolutionary conserved plant histone modification that marks active genes. Plant physiology, 170(3), 1566-1577.

Derkacheva, M., Steinbach, Y., Wildhaber, T., Mozgova, I., Mahrez, W., Nanni, P., ... & Hennig, L. (2013). Arabidopsis MSI1 connects LHP1 to PRC2 complexes. The EMBO journal, 32(14), 2073-2085.

Milkereit J., Frossard E., Stoll P., Wagg C., Niklaus PA. (2018). Experimental disconnection from common mycorrhizal networks has little effect on competitive interactions among common temperate grassland species. Journal of Ecology106:2332-2343. DOI: 10.1111/1365-2745.12984

Pellkofer S., van der Heijden M.G.A., Schmid B., Wagg C. (2016) Soil Communities Promote Temporal Stability and Species Asynchrony in Experimental Grassland Communities. PLoS ONE 11(2): e0148015

Smith, J. R., Ghazoul, J., Burslem, D. F., Itoh, A., Khoo, E., Lee, S. L., ... & Kettle, C. J. (2018). Are patterns of fine-scale spatial genetic structure consistent between sites within tropical tree species?. PloS one, 13(3).

Smith, J.R., Bagchi, R., Kettle, C.J., Burslem, D.F.R.P., Maycock, C.R., Khoo, E. & Ghazoul, J. (2016) Predicting the terminal velocity of dipterocarp fruit. Biotropica, 48, 154-158

Smith J.R., Bagchi R., Ellens J., Kettle C., Burslem D.F.R.P., Maycock C.R., Khoo E., Ghazoul J. (2015) Predicting dispersal of auto-gyrating seed in tropical trees: a case study from the Dipterocarpaceae Ecology and Evolution 5 (9), 1794-1801

Smith, J.R., Bagchi, R., Ellens, J., Kettle, C.J., Burslem, D.F.R.P., Maycock, C.R., Khoo, E. and Ghazoul, J. (2015) Predicting dispersal of auto-gyrating fruit in tropical trees: a case study from the Dipterocarpaceae. Methods in Ecology and Evolution, 5, 1794-1801

Stockenhuber, R., Zoller, S., Shimizu-Inatsugi, R., Gugerli, F., Shimizu, K. K., Widmer, A., Fischer, M.C. (2015) Efficient detection of novel nuclear markers for brassicaceae by transcriptome sequencing. PLoS ONE, 10(6):e0128181

Turner B., Munzinger J., Duangjai S., Temsch E.M., Stockenhuber R., Barfuss M.H.J., Chase M.W., Samuel R. (2013) Molecular phylogenetics of New Caledonian Diospyros (Ebenaceae) using plastid and nuclear markers. Molecular Phylogenetics and Evolution 69, 740-763

Lucek, K., Galli, A., Gurten, S., Hohmann, N., Maccagni, A., Patsiou, T., & Willi, Y. (2019). Metabarcoding of honey to assess differences in plant-pollinator interactions between urban and non-urban sites. Apidologie, 50(3), 317-329.

Stubbs, R. L., Theodoridis, S., Keller, B., & Conti, E. (2019, March). The evolutionary roles of hybridization and introgression: investigating species and genomic boundaries using the model plant system Primula (Primulaceae). In Integrative And Comparative Biology (Vol. 59, Pp. E417-E417). Journals Dept, 2001 Evans Rd, Cary, Nc 27513 Usa: Oxford Univ Press Inc.

Theodoridis, S., Nogués‐Bravo, D., & Conti, E. (2019). The role of cryptic diversity and its environmental correlates in global conservation status assessments: Insights from the threatened bird's‐eye primrose (Primula farinosa L.). Diversity and Distributions, 25(9), 1457-1471.

Theodoridis, S., Patsiou, T. S., Randin, C., & Conti, E. (2018). Forecasting range shifts of a cold‐adapted species under climate change: are genomic and ecological diversity within species crucial for future resilience?. Ecography, 41(8), 1357-1369.

Voltas, J., Shestakova, T. A., Patsiou, T., Di Matteo, G., & Klein, T. (2018). Ecotypic variation and stability in growth performance of the thermophilic conifer Pinus halepensis across the Mediterranean basin. Forest ecology and management, 424, 205-215.

Koutroumpa, K., Theodoridis, S., Warren, B. H., Jiménez, A., Celep, F., Doğan, M., ... & Moura, M. (2018). An expanded molecular phylogeny of Plumbaginaceae, with emphasis on Limonium (sea lavenders): Taxonomic implications and biogeographic considerations. Ecology and evolution, 8(24), 12397-12424.

Patsiou, T. S., Conti, E., Theodoridis, S., & Randin, C. F. (2017). The contribution of cold air pooling to the distribution of a rare and endemic plant of the Alps. Plant Ecology & Diversity, 10(1), 29-42.

Theodoridis S., Randin C.F., Szövényi P., Boucher F., Patsiou T.S., Conti E. (2016) How do cold-adapted plants respond to climatic cycles? Interglacial expansion explains current distribution and genomic diversity in Primula farinosa L. Systematic Biology

Patsiou T.S., Conti E., Zimmermann N.E., Theodoridis S., Randin. C.F. (2014) Topo‐climatic microrefugia explain the persistence of a rare endemic plant in the Alps during the last 21 millennia. Global Change Biology 20:2286–2300

Theodoridis S., Randin C., Broennimann O., Patsiou T.S., Conti E. (2013) Divergent and narrower climatic niches characterize polyploid species of European primroses in Primula sect. Aleuritia. Journal of Biogeography, 40:1278–1289

Theodoridis S., Stefanaki A., Tezcan M., Aki C., Kokkini S., Vlachonasios K.E. (2012) DNA barcoding in native plants of the Labiatae (Lamiaceae) family from Chios Island (Greece) and the adjacent Çeşme-Karaburun Peninsula (Turkey). Molecular Ecology Resources, 12:620–633

Wingen L. U., Orford S.,  Goram R., Leverington‑Waite M., Bilham L., Patsiou T.S., Ambrose M., Dicks J., Griffiths S. (2014) Establishing the A. E. Watkins landrace cultivar collection as a resource for systematic gene discovery in bread wheat. Theoretical and Applied Genetics 127(8)